selected options moved to hidden config

smoderp2d/.config.ini

@@ -1,7 +1,27 @@
-[outputs]
+[output]
 # if extraout is eq yes the model will provide more detailed results - will
 # show more variables in hydrographs point***.csv. It is usefull for debuging
 # model development or more stientific applications. For regular use the
-# extraout=no, which will provide the regural output.
+# extraout: no, which will provide the regural output.
 # yes or no
-extraout = yes
+# default: no
+extraout: yes
+# experimental times when rasters will be printed
+# default: empty value for off
+printtimes:
+
+[logging]
+# logging level
+#  - CRITICAL
+#  - ERROR
+#  - WARNING
+#  - INFO
+#  - DEBUG
+#  - NOTSET
+# default: INFO
+level: DEBUG
+
+[processes]
+# Mfda enabled
+# default: False
+mfda: False

smoderp2d/providers/base/__init__.py

@@ -169,9 +169,11 @@ def add_logging_handler(handler, formatter=None):
                 # avoid duplicated handlers (e.g. in case of ArcGIS)
                 Logger.addHandler(handler)
 
-    @staticmethod
-    def __load_hidden_config():
-        # load hidden configuration with advanced settings
+    def __load_hidden_config(self):
+        """Load hidden configuration with advanced settings.
+
+        return ConfigParser: object
+        """
         _path = os.path.join(
             os.path.dirname(__file__), '..', '..', '.config.ini'
         )
@@ -183,14 +185,31 @@ def __load_hidden_config():
         config = ConfigParser()
         config.read(_path)
 
-        if not config.has_option('outputs', 'extraout'):
-            raise ConfigError(
-                'Section "outputs" or option "extraout" is not set properly '
-                'in file {}'.format(_path)
-            )
+        # set logging level
+        Logger.setLevel(config.get('logging', 'level', fallback=logging.INFO))
+        # sys.stderr logging
+        self.add_logging_handler(
+            logging.StreamHandler(stream=sys.stderr)
+        )
 
         return config
 
+    def _load_data_from_hidden_config(self, config, ignore=[]):
+        """Load data from hidden config.
+
+        :param ConfigParser config: loaded config file
+        :param list ignore: list of options to me ignored
+
+        :return dict
+        """
+        data = {}
+        data['prtTimes'] = self._hidden_config.get('output', 'printtimes', fallback=None)
+        data['extraout'] = self._hidden_config.getboolean('output', 'extraout', fallback=False)
+        if 'mfda' not in ignore:
+            data['mfda'] = self._hidden_config.getboolean('processes', 'mfda', fallback=False)
+
+        return data
+
     def _load_config(self):
         # load configuration
         if not os.path.exists(self.args.config_file):
@@ -202,15 +221,6 @@ def _load_config(self):
         config.read(self.args.config_file)
 
         try:
-            # set logging level
-            Logger.setLevel(
-                config.get('logging', 'level', fallback=logging.INFO)
-            )
-            # sys.stderr logging
-            self.add_logging_handler(
-                logging.StreamHandler(stream=sys.stderr)
-            )
-
             # must be defined for _cleanup() method
             Globals.outdir = config.get('output', 'outdir')
         except (NoSectionError, NoOptionError) as e:
@@ -249,15 +259,10 @@ def _load_roff(self):
 
         # some variables configs can be changes after loading from
         # pickle.dump such as end time of simulation
-
         if self._config.get('time', 'endtime'):
             data['end_time'] = self._config.getfloat('time', 'endtime')
-        #  time of flow algorithm
-        data['mfda'] = self._config.getboolean(
-            'processes', 'mfda', fallback=False
-        )
 
-        #  type of computing
+        # type of computing
         data['type_of_computing'] = CompType()[
             self._config.get('processes', 'typecomp', fallback='stream_rill')
         ]
@@ -271,20 +276,15 @@ def _load_roff(self):
             except TypeError:
                 raise ProviderError('Invalid rainfall file')
 
-        # some self._configs are not in pickle.dump
-        data['extraOut'] = self._config.getboolean(
-            'output', 'extraout', fallback=False
-        )
-        # rainfall data can be saved
-        data['prtTimes'] = self._config.get(
-            'output', 'printtimes', fallback=None
-        )
-
         data['maxdt'] = self._config.getfloat('time', 'maxdt')
 
         # ensure that dx and dy are defined
         data['dx'] = data['dy'] = math.sqrt(data['pixel_area'])
 
+        # load hidden config
+        data.update(self._load_data_from_hidden_config(
+            self._hidden_config))
+
         return data
 
     def load(self):
@@ -334,9 +334,19 @@ def _set_globals(self, data):
         Globals.subflow = comp_type['subflow_rill']
         Globals.isRill = comp_type['rill']
         Globals.isStream = comp_type['stream']
-        Globals.prtTimes = data.get('prtTimes', None)
-        Globals.extraOut = self._hidden_config.getboolean('outputs', 'extraout')
-        Globals.end_time *= 60  # convert min to sec
+
+        # load hidden config
+        hidden_config = self._load_data_from_hidden_config(self._hidden_config)
+        if 'prtTimes' in data:
+            Globals.prtTimes = data['prtTimes']
+        else:
+            Globals.prtTimes = hidden_config.get('prtTimes', None)
+        if 'extraout' in data:
+            Globals.extraOut = data['extraout']
+        else:
+            Globals.extraOut = hidden_config.get('extraout', False)
+
+        Globals.end_time *= 60 # convert min to sec
 
         # If profile1d provider is used the values
         # should be set in the loop at the beginning

smoderp2d/providers/base/data_preparation.py

@@ -613,6 +613,7 @@ def run(self):
 
         Logger.info("Processing stream network:")
         if self._input_params['streams'] and self._input_params['channel_properties_table'] and self._input_params['streams_channel_type_fieldname']:
+            self.data['type_of_computing'] = CompType.stream_rill
             self._prepare_streams(
                 self._input_params['streams'],
                 self._input_params['channel_properties_table'],
@@ -716,18 +717,6 @@ def _get_points_dem_coords(self, x, y):
 
     def _prepare_streams(self, stream, stream_shape_tab, stream_shape_code,
                          dem, aoi_polygon):
-        self.data['type_of_computing'] = CompType.rill
-
-        # pocitam vzdy s ryhama pokud jsou zadane vsechny vstupy pro
-        # vypocet toku, streams se pocitaji a type_of_computing je 3
-        listin = [self._input_params['streams'],
-                  self._input_params['channel_properties_table'],
-                  self._input_params['streams_channel_type_fieldname']]
-        tflistin = [len(i) > 1 for i in listin]  # TODO: ???
-
-        if all(tflistin):
-            self.data['type_of_computing'] = CompType.stream_rill
-
         if self.data['type_of_computing'] in (CompType.stream_rill, CompType.stream_subflow_rill):
             Logger.info("Clipping stream to AoI outline ...")
             stream_aoi = self._stream_clip(stream, aoi_polygon)

smoderp2d/providers/profile1d/__init__.py

@@ -163,15 +163,6 @@ def _load_roff(self):
         # Logger.progress(10)
 
         # general settings
-        # some self._configs are not in pickle.dump
-        data['extraOut'] = self._config.getboolean(
-            'output', 'extraout', fallback=False
-        )
-        # rainfall data can be saved
-        data['prtTimes'] = self._config.get(
-            'output', 'printtimes', fallback=None
-        )
-
         resolution = self._config.getfloat('domain', 'res')
         data['r'] = self._compute_rows(joint_data['horizontalProjection[m]'],
                                        resolution)
@@ -258,6 +249,10 @@ def _load_roff(self):
         slope_width = float(self._config.get('domain', 'slope_width'))
         data['slope_width'] = slope_width
 
+        # load hidden config
+        data.update(self._load_data_from_hidden_config(
+            self._hidden_config, ignore=['mfda']))
+
         return data
 
     @staticmethod

tests/config_files/gistest.ini

@@ -20,31 +20,13 @@ endtime: 40
 # output directory
 # content of the directory is erased at the beginning of the program
 outdir: tests/data/output
-# experimental times when rasters will be printed
-# default: empty value for off
-printtimes:
-
-[logging]
-# logging level
-#  - CRITICAL
-#  - ERROR
-#  - WARNING
-#  - INFO
-#  - DEBUG
-#  - NOTSET
-# default: INFO
-level: DEBUG
 
 [processes]
 # type of processes involved
 #  - sheet_only
 #  - rill
-#  - sheet_stream
 #  - stream_rill
 #  - subflow_rill
 #  - stream_subflow_rill
 # Default: stream_rill
-typecomp: rill
-# Mfda enabled
-# default: False
-mfda: False
+typecomp: rill

tests/config_files/profile1d.ini

@@ -21,17 +21,3 @@ endtime: 60
 # output directory
 # content of the directory is erased at the beginning of the program
 outdir: tests/data/output
-# experimental times when rasters will be printed
-# default: empty value for off
-printtimes:
-
-[logging]
-# logging level
-#  - CRITICAL
-#  - ERROR
-#  - WARNING
-#  - INFO
-#  - DEBUG
-#  - NOTSET
-# default: INFO
-level: DEBUG

tests/config_files/quicktest_rill.ini

@@ -20,20 +20,6 @@ endtime: 60
 # output directory
 # content of the directory is erased at the beginning of the program
 outdir: tests/data/output
-# experimental times when rasters will be printed
-# default: empty value for off
-printtimes:
-
-[logging]
-# logging level
-#  - CRITICAL
-#  - ERROR
-#  - WARNING
-#  - INFO
-#  - DEBUG
-#  - NOTSET
-# default: INFO
-level: DEBUG
 
 [processes]
 # type of processes involved
@@ -45,6 +31,3 @@ level: DEBUG
 #  - stream_subflow_rill
 # Default: stream_rill
 typecomp: rill
-# Mfda enabled
-# default: False
-mfda: False

tests/config_files/quicktest_sheet.ini

@@ -20,20 +20,6 @@ endtime: 60
 # output directory
 # content of the directory is erased at the beginning of the program
 outdir: tests/data/output
-# experimental times when rasters will be printed
-# default: empty value for off
-printtimes:
-
-[logging]
-# logging level
-#  - CRITICAL
-#  - ERROR
-#  - WARNING
-#  - INFO
-#  - DEBUG
-#  - NOTSET
-# default: INFO
-level: DEBUG
 
 [processes]
 # type of processes involved
@@ -45,6 +31,3 @@ level: DEBUG
 #  - stream_subflow_rill
 # Default: stream_rill
 typecomp: sheet_only
-# Mfda enabled
-# default: False
-mfda: False

tests/config_files/test_rill.ini

@@ -20,20 +20,6 @@ endtime: 60
 # output directory
 # content of the directory is erased at the beginning of the program
 outdir: tests/data/output
-# experimental times when rasters will be printed
-# default: empty value for off
-printtimes:
-
-[logging]
-# logging level
-#  - CRITICAL
-#  - ERROR
-#  - WARNING
-#  - INFO
-#  - DEBUG
-#  - NOTSET
-# default: INFO
-level: DEBUG
 
 [processes]
 # type of processes involved
@@ -45,6 +31,3 @@ level: DEBUG
 #  - stream_subflow_rill
 # Default: stream_rill
 typecomp: rill
-# Mfda enabled
-# default: False
-mfda: False

tests/config_files/test_sheet.ini

@@ -20,20 +20,6 @@ endtime: 60
 # output directory
 # content of the directory is erased at the beginning of the program
 outdir: tests/data/output
-# experimental times when rasters will be printed
-# default: empty value for off
-printtimes:
-
-[logging]
-# logging level
-#  - CRITICAL
-#  - ERROR
-#  - WARNING
-#  - INFO
-#  - DEBUG
-#  - NOTSET
-# default: INFO
-level: DEBUG
 
 [processes]
 # type of processes involved
@@ -45,6 +31,3 @@ level: DEBUG
 #  - stream_subflow_rill
 # Default: stream_rill
 typecomp: sheet_only
-# Mfda enabled
-# default: False
-mfda: False