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Merge branch 'master' of github.com:stuart-lab/f2m
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timoast committed Jul 23, 2024
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Create region x cell matrix from a fragment file.

```
f2m -f <fragments.tsv.gz> -b <peaks.bed> -c <cells.txt> -o <matrix.mtx>
f2m -f <fragments.tsv.gz> -b <peaks.bed> -c <cells.txt> -o <output>
```

We also provide a simple tool to select cell barcodes from the fragment file
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