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Version 0.2.0
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@timoast timoast released this 17 Jan 16:48
· 1752 commits to master since this release
v0.2.0
148bbbe

Changes:

  • Removed dependency on TFBSTools, motifmatchr, AnnotationDbi, ggbio, AnnotationFilter
  • Renamed PeriodPlot to FragmentHistogram
  • Removed motif dimension reduction functions
  • Removed motif clustering functions
  • Removed neighbors and reductions slots from motif class
  • Added motif.names slot to motif class
  • Added ability to plot peak ranges in CoveragePlot
  • Added ability to plot gene annotations from GRanges object
  • Changed gene plot style in CoveragePlot
  • Allow passing additional arguments to FilterFragments
  • Add inst/extdata
  • Change DESCRIPTION file so that Bioconductor dependencies are automatically installed
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