Prepare for next release

CITATION.cff

@@ -8,7 +8,7 @@ message: 'To cite package "arkhe" in publications use:'
 type: software
 license: GPL-3.0-or-later
 title: 'arkhe: Tools for Cleaning Rectangular Data'
-version: 1.7.0
+version: 1.8.0
 doi: 10.5281/zenodo.3526659
 identifiers:
 - description: The concept DOI.
@@ -62,6 +62,9 @@ identifiers:
 - description: The versioned DOI for version 1.7.0.
   type: doi
   value: 10.5281/zenodo.13121710
+- description: The CRAN DOI
+  type: doi
+  value: 10.32614/cran.package.arkhe
 abstract: A dependency-free collection of simple functions for cleaning rectangular
   data. This package allows to detect, count and replace values or discard rows/columns
   using a predicate function. In addition, it provides tools to check conditions and
@@ -71,7 +74,6 @@ authors:
   given-names: Nicolas
   email: nicolas.frerebeau@u-bordeaux-montaigne.fr
   orcid: https://orcid.org/0000-0001-5759-4944
-  affiliation: Université Bordeaux Montaigne
 preferred-citation:
   type: manual
   title: 'arkhe: Tools for Cleaning Rectangular Data'
@@ -80,12 +82,11 @@ preferred-citation:
     given-names: Nicolas
     email: nicolas.frerebeau@u-bordeaux-montaigne.fr
     orcid: https://orcid.org/0000-0001-5759-4944
-    affiliation: Université Bordeaux Montaigne
   year: '2024'
   institution:
     name: Université Bordeaux Montaigne
     address: Pessac, France
-  notes: R package version 1.7.0
+  notes: R package version 1.8.0
   url: https://packages.tesselle.org/arkhe/
   doi: 10.5281/zenodo.3526659
 repository: https://CRAN.R-project.org/package=arkhe
@@ -96,7 +97,6 @@ contact:
   given-names: Nicolas
   email: nicolas.frerebeau@u-bordeaux-montaigne.fr
   orcid: https://orcid.org/0000-0001-5759-4944
-  affiliation: Université Bordeaux Montaigne
 keywords:
 - data cleaning
 - statistics
@@ -123,7 +123,6 @@ references:
     name: R Foundation for Statistical Computing
     address: Vienna, Austria
   year: '2024'
-  doi: 10.32614/CRAN.package.methods
 - type: software
   title: stats
   abstract: 'R: A Language and Environment for Statistical Computing'
@@ -134,7 +133,6 @@ references:
     name: R Foundation for Statistical Computing
     address: Vienna, Austria
   year: '2024'
-  doi: 10.32614/CRAN.package.stats
 - type: software
   title: utils
   abstract: 'R: A Language and Environment for Statistical Computing'
@@ -145,7 +143,6 @@ references:
     name: R Foundation for Statistical Computing
     address: Vienna, Austria
   year: '2024'
-  doi: 10.32614/CRAN.package.utils
 - type: software
   title: tinytest
   abstract: 'tinytest: Lightweight and Feature Complete Unit Testing Framework'

DESCRIPTION

@@ -1,9 +1,9 @@
 Package: arkhe
 Title: Tools for Cleaning Rectangular Data
-Version: 1.7.0.9000
+Version: 1.8.0
 Authors@R: c(
     person("Nicolas", "Frerebeau", , "nicolas.frerebeau@u-bordeaux-montaigne.fr", role = c("aut", "cre"),
-           comment = c(ORCID = "0000-0001-5759-4944", affiliation = "Université Bordeaux Montaigne")),
+           comment = c(ORCID = "0000-0001-5759-4944")),
     person("Brice", "Lebrun", , "brice.lebrun@u-bordeaux-montaigne.fr", role = "ctb",
            comment = c(ORCID = "0000-0001-7503-8685", "Logo designer")),
     person("Université Bordeaux Montaigne", role = "fnd"),

NEWS.md

@@ -1,4 +1,4 @@
-# arkhe 1.7.0.9000
+# arkhe 1.8.0
 ## New classes and methods
 * Add `append_column()` to add a named vector as a column in a `data.frame`.
 * Add `assert_nrow()` and `assert_ncol()` to check the number of rows/columns.

R/arkhe-package.R

@@ -2,7 +2,7 @@
 #'  \tabular{ll}{
 #'   **Package:** \tab arkhe \cr
 #'   **Type:** \tab Package \cr
-#'   **Version:** \tab 1.7.0 \cr
+#'   **Version:** \tab 1.8.0 \cr
 #'   **License:** \tab GPL-3 \cr
 #'   **Zenodo:** \tab \doi{10.5281/zenodo.3526659} \cr
 #'  }

README.Rmd

@@ -74,16 +74,19 @@ X
 
 ## Count missing values in rows
 count(X, f = is.na, margin = 1)
+
 ## Count non-missing values in columns
 count(X, f = is.na, margin = 2, negate = TRUE)
 
 ## Find row with NA
 detect(X, f = is.na, margin = 1)
+
 ## Find column without any NA
 detect(X, f = is.na, margin = 2, negate = TRUE, all = TRUE)
 
 ## Remove row with any NA
 discard(X, f = is.na, margin = 1, all = FALSE)
+
 ## Remove column with any NA
 discard(X, f = is.na, margin = 2, all = FALSE)
 

README.md

@@ -49,7 +49,7 @@ To cite arkhe in publications use:
 Frerebeau N (2024). *arkhe: Tools for Cleaning Rectangular Data*.
 Université Bordeaux Montaigne, Pessac, France.
 <doi:10.5281/zenodo.3526659> <https://doi.org/10.5281/zenodo.3526659>, R
-package version 1.7.0.9000, <https://packages.tesselle.org/arkhe/>.
+package version 1.8.0, <https://packages.tesselle.org/arkhe/>.
 
 This package is a part of the tesselle project
 <https://www.tesselle.org>.
@@ -84,48 +84,51 @@ k <- sample(1:25, 3, FALSE)
 X[k] <- NA
 X
 #>      [,1] [,2] [,3] [,4] [,5]
-#> [1,]    1    7   10    2    6
-#> [2,]    9    7    7    3    5
-#> [3,]    6   NA    8   10    5
-#> [4,]    1   10    8    2   NA
-#> [5,]   NA    1    4    9    8
+#> [1,]   10   10   NA    7    7
+#> [2,]    6    4    7   10    3
+#> [3,]    7   10    5    9    6
+#> [4,]    7   10    4   NA    2
+#> [5,]   NA    9    6    9    7
 
 ## Count missing values in rows
 count(X, f = is.na, margin = 1)
-#> [1] 0 0 1 1 1
+#> [1] 1 0 0 1 1
+
 ## Count non-missing values in columns
 count(X, f = is.na, margin = 2, negate = TRUE)
-#> [1] 4 4 5 5 4
+#> [1] 4 5 4 4 5
 
 ## Find row with NA
 detect(X, f = is.na, margin = 1)
-#> [1] FALSE FALSE  TRUE  TRUE  TRUE
+#> [1]  TRUE FALSE FALSE  TRUE  TRUE
+
 ## Find column without any NA
 detect(X, f = is.na, margin = 2, negate = TRUE, all = TRUE)
-#> [1] FALSE FALSE  TRUE  TRUE FALSE
+#> [1] FALSE  TRUE FALSE FALSE  TRUE
 
 ## Remove row with any NA
 discard(X, f = is.na, margin = 1, all = FALSE)
 #>      [,1] [,2] [,3] [,4] [,5]
-#> [1,]    1    7   10    2    6
-#> [2,]    9    7    7    3    5
+#> [1,]    6    4    7   10    3
+#> [2,]    7   10    5    9    6
+
 ## Remove column with any NA
 discard(X, f = is.na, margin = 2, all = FALSE)
 #>      [,1] [,2]
-#> [1,]   10    2
-#> [2,]    7    3
-#> [3,]    8   10
-#> [4,]    8    2
-#> [5,]    4    9
+#> [1,]   10    7
+#> [2,]    4    3
+#> [3,]   10    6
+#> [4,]   10    2
+#> [5,]    9    7
 
 ## Replace NA with zeros
 replace_NA(X, value = 0)
 #>      [,1] [,2] [,3] [,4] [,5]
-#> [1,]    1    7   10    2    6
-#> [2,]    9    7    7    3    5
-#> [3,]    6    0    8   10    5
-#> [4,]    1   10    8    2    0
-#> [5,]    0    1    4    9    8
+#> [1,]   10   10    0    7    7
+#> [2,]    6    4    7   10    3
+#> [3,]    7   10    5    9    6
+#> [4,]    7   10    4    0    2
+#> [5,]    0    9    6    9    7
 ```
 
 ## Contributing

codemeta.json

@@ -8,7 +8,7 @@
   "codeRepository": "https://github.com/tesselle/arkhe",
   "issueTracker": "https://github.com/tesselle/arkhe/issues",
   "license": "https://spdx.org/licenses/GPL-3.0",
-  "version": "1.7.0.9000",
+  "version": "1.8.0",
   "programmingLanguage": {
     "@type": "ComputerLanguage",
     "name": "R",
@@ -96,7 +96,7 @@
     },
     "SystemRequirements": null
   },
-  "fileSize": "293.833KB",
+  "fileSize": "328.602KB",
   "citation": [
     {
       "@type": "SoftwareSourceCode",
@@ -111,7 +111,7 @@
       "name": "{arkhe: Tools for Cleaning Rectangular Data}",
       "identifier": "10.5281/zenodo.3526659",
       "url": "https://packages.tesselle.org/arkhe/",
-      "description": "R package version 1.7.0.9000",
+      "description": "R package version 1.8.0",
       "@id": "https://doi.org/10.5281/zenodo.3526659",
       "sameAs": "https://doi.org/10.5281/zenodo.3526659"
     }

revdep/README.md

@@ -1,24 +1,23 @@
 # Platform
 
-|field    |value                                                                                |
-|:--------|:------------------------------------------------------------------------------------|
-|version  |R version 4.4.1 (2024-06-14)                                                         |
-|os       |Ubuntu 22.04.4 LTS                                                                   |
-|system   |x86_64, linux-gnu                                                                    |
-|ui       |RStudio                                                                              |
-|language |(EN)                                                                                 |
-|collate  |fr_FR.UTF-8                                                                          |
-|ctype    |fr_FR.UTF-8                                                                          |
-|tz       |Europe/Paris                                                                         |
-|date     |2024-07-29                                                                           |
-|rstudio  |2024.04.2+764 Chocolate Cosmos (desktop)                                             |
-|pandoc   |3.1.11 @ /usr/lib/rstudio/resources/app/bin/quarto/bin/tools/x86_64/ (via rmarkdown) |
+|field    |value                        |
+|:--------|:----------------------------|
+|version  |R version 4.4.1 (2024-06-14) |
+|os       |Ubuntu 22.04.5 LTS           |
+|system   |x86_64, linux-gnu            |
+|ui       |X11                          |
+|language |(EN)                         |
+|collate  |fr_FR.UTF-8                  |
+|ctype    |fr_FR.UTF-8                  |
+|tz       |Europe/Paris                 |
+|date     |2024-11-07                   |
+|pandoc   |NA                           |
 
 # Dependencies
 
-|package |old   |new   |Δ  |
-|:-------|:-----|:-----|:--|
-|arkhe   |1.6.0 |1.7.0 |*  |
+|package |old   |new        |Δ  |
+|:-------|:-----|:----------|:--|
+|arkhe   |1.7.0 |1.7.0.9000 |*  |
 
 # Revdeps