A comprehensive and customizable R package for microbiome analysis.
ESKRIM is a reference-free tool that compares microbial richness in shotgun metagenomic samples by counting k-mers
code to reproduce AIH results
The following codes are focused on microbiome analysis, alpha, beta and relative abundance differences.
🦠Research project in Bioinformatics Institute 2023-2024
Microbiome Diversity Inspector - A platform for visual analysis of microbiome data.
Microbiome Data Analysis
verificacao da homogeneidade biotica em bioma de restinga de mata atlantica atraves de testes de alfa e beta diversidade para riqueza e abundancia de especies
Alpha, beta and gamma diversities are computed and visualized using formulas and using the R package vegetarian.
metaGEENOME is a 16S rRNA metagenomic analysis tool that encompasses nearly all steps of downstream analysis.
Take advantage of the adehabitat packages in R to determine ecological community richness: including alpha, beta, and gamma diversity!
🦇🧫📊Study on bat gut shotgun metagenomics
TEIXEIRA, J. V. A.; SOUZA, E. C. Use of microbial fuel cell systems in wastewater treatment in connection with bioenergy generation. Desafios. Revista Interdisciplinar da Universidade Federal do Tocantins. Palmas, 2025. DOI: // Microbial fuel cells: Unveiling microbial diversity for sustainable wastewater treatment and bioenergy production
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