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TrackMate

TrackMate is your buddy for everyday tracking.
README.md

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  1. TrackMate Public

    TrackMate is your buddy for your everyday tracking.

    Java 181 76

  2. TrackMate-examples Public

    A simple repository that shows how to extend TrackMate with your own modules.

    Java 2 9

Repositories

Showing 10 of 20 repositories
  • TrackMate Public

    TrackMate is your buddy for your everyday tracking.

    Java 181 GPL-3.0 76 18 6 Updated Mar 7, 2025
  • TrackMate-CTCRunner Public

    Batch measurements of the Cell-Tracking-Challenge metrics using TrackMate.

    Java 2 AGPL-3.0 1 2 0 Updated Mar 7, 2025
  • TrackMate-Trackastra Public

    Trackastra integration as a tracker module in TrackMate.

    Java 1 GPL-3.0 0 0 0 Updated Mar 4, 2025
  • TrackMate-Cellpose Public

    Tentative Cellpose integration in TrackMate.

    Java 5 AGPL-3.0 3 2 1 Updated Mar 4, 2025
  • TrackMate-Skeleton Public

    TrackMate module for skeletonization of tissue end points and tracking

    Java 1 GPL-3.0 1 1 0 Updated Aug 29, 2024
  • TrackMate-Pairing Public

    A Fiji plugin to pair two TrackMate files and extract statistics from pairs.

    Java 0 GPL-3.0 0 0 0 Updated Jul 25, 2024
  • TrackMate-Kymograph Public

    Generate kymographs from lines between two tracks in TrackMate.

    Java 0 GPL-3.0 0 1 0 Updated Jul 22, 2024
  • TrackMate-Oneat Public

    TrackMate extension for oneat for verifying lineage trees

    Java 3 GPL-3.0 0 1 0 Updated Jul 2, 2024
  • TrackMate-Weka Public

    Using a Weka classifier as detector for TrackMate.

    Java 1 GPL-3.0 0 0 1 Updated May 1, 2024
  • TrackMate-Ilastik Public

    Using Ilastik pixel classifiers as detector for TrackMate.

    Java 1 GPL-3.0 1 0 1 Updated May 1, 2024
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