Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Bug fix for another forcing option GSWP3 #64

Merged
merged 5 commits into from
Feb 29, 2024
Merged

Bug fix for another forcing option GSWP3 #64

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
5 commits
Select commit Hold shift + click to select a range
8315edd
fix gswp3 failure
chan-hoo Feb 29, 2024
69b06ba
fix path for output
chan-hoo Feb 29, 2024
711c322
add yaml for gswp3 on hera
chan-hoo Feb 29, 2024
179de68
fix ntime error
chan-hoo Feb 29, 2024
973c392
change offset format from day to hours
chan-hoo Feb 29, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
9 changes: 5 additions & 4 deletions jobs/JLANDDA_RUN_FCST
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -111,6 +111,7 @@ if [[ $do_jedi == "YES" && ${ATMOS_FORC} == "gswp3" ]]; then
fi

# save analysis restart
mkdir -p ${MEM_MODL_OUTDIR}/restarts/tile
for tile in 1 2 3 4 5 6
do
cp ${MEM_WORKDIR}/ufs_land_restart.${YYYY}-${MM}-${DD}_${HH}-00-00.tile${tile}.nc ${MEM_MODL_OUTDIR}/restarts/tile/ufs_land_restart_anal.${YYYY}-${MM}-${DD}_${HH}-00-00.tile${tile}.nc
Expand Down Expand Up @@ -254,8 +255,8 @@ if [[ ${ATMOS_FORC} == "era5" ]]; then
fi

if [[ ${ATMOS_FORC} == "gswp3" ]]; then
for tile in 1 2 3 4 5 6
do
cp ${MEM_WORKDIR}/noahmp_output/${TEST_NAME_RST}/ufs.cpld.lnd.out.${nYYYY}-${nMM}-${nDD}-00000.tile${tile}.nc ${MEM_MODL_OUTDIR}/restarts/tile/ufs_land_restart_back.${nYYYY}-${nMM}-${nDD}_${nHH}-00-00.tile${tile}.nc
done
for tile in 1 2 3 4 5 6
do
cp ${OUTDIR}/${mem_ens}/noahmp/${TEST_NAME_RST}/ufs.cpld.lnd.out.${nYYYY}-${nMM}-${nDD}-00000.tile${tile}.nc ${MEM_MODL_OUTDIR}/restarts/tile/ufs_land_restart_back.${nYYYY}-${nMM}-${nDD}_${nHH}-00-00.tile${tile}.nc
done
fi
171 changes: 171 additions & 0 deletions parm/land_analysis_gswp3_hera.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,171 @@
workflow:
attrs:
realtime: false
scheduler: slurm
cycledef:
- attrs:
group: epic
spec: 200001030000 200001030000 24:00:00
entities:
MACHINE: "hera"
ACCOUNT: "epic"
EXP_NAME: "LETKF"
EXP_BASEDIR: "/scratch2/NAGAPE/epic/Chan-hoo.Jeon/landda_gswp3"
JEDI_INSTALL: "/scratch2/NAGAPE/epic/UFS_Land-DA/jedi"
LANDDA_INPUTS: "/scratch2/NAGAPE/epic/UFS_Land-DA/inputs"
FORCING: "gswp3"
RES: "96"
FCSTHR: "24"
NPROCS_ANA: "6"
NPROCS_FCST: "6"
OBS_TYPES: "GHCN"
fv3bundle_vn: "psl_develop"
DAtype: "letkfoi_snow"
SNOWDEPTHVAR: "snwdph"
TSTUB: "oro_C96.mx100"
WORKDIR: "&EXP_BASEDIR;/workdir"
CYCLEDIR: "&EXP_BASEDIR;/land-DA_workflow"
EXECdir: "&CYCLEDIR;/exec"
OUTDIR: "&EXP_BASEDIR;/landda_expts/DA_gswp3_test"
LOG: "&EXP_BASEDIR;/tests"
PATHRT: "&EXP_BASEDIR;"
CTIME: "<cyclestr>@Y@m@d@H</cyclestr>"
PTIME: "<cyclestr offset='-24:00:00'>@Y@m@d@H</cyclestr>"
NTIME: "<cyclestr offset='24:00:00'>@Y@m@d@H</cyclestr>"
log: "&LOG;/workflow.log"
tasks:
task_prepexp:
envars:
MACHINE: "&MACHINE;"
ACCOUNT: "&ACCOUNT;"
EXP_NAME: "&EXP_NAME;"
LANDDA_INPUTS: "&LANDDA_INPUTS;"
ATMOS_FORC: "&FORCING;"
RES: "&RES;"
TSTUB: "&TSTUB;"
WORKDIR: "&WORKDIR;"
CYCLEDIR: "&CYCLEDIR;"
EXECdir: "&EXECdir;"
OUTDIR: "&OUTDIR;"
CTIME: "&CTIME;"
PTIME: "&PTIME;"
account: "&ACCOUNT;"
command: "&CYCLEDIR;/jobs/JLANDDA_PREP_EXP"
jobname: prepexp
cores: 1
walltime: 00:02:00
queue: batch
task_prepobs:
envars:
OBS_TYPES: "&OBS_TYPES;"
MACHINE: "&MACHINE;"
ACCOUNT: "&ACCOUNT;"
EXP_NAME: "&EXP_NAME;"
LANDDA_INPUTS: "&LANDDA_INPUTS;"
ATMOS_FORC: "&FORCING;"
WORKDIR: "&WORKDIR;"
CYCLEDIR: "&CYCLEDIR;"
EXECdir: "&EXECdir;"
OUTDIR: "&OUTDIR;"
CTIME: "&CTIME;"
PTIME: "&PTIME;"
account: "&ACCOUNT;"
command: "&CYCLEDIR;/jobs/JLANDDA_PREP_OBS"
jobname: prepobs
cores: 1
walltime: 00:02:00
queue: batch
dependency:
taskdep:
attrs:
task: prepexp
task_prepbmat:
envars:
MACHINE: "&MACHINE;"
ACCOUNT: "&ACCOUNT;"
EXP_NAME: "&EXP_NAME;"
LANDDA_INPUTS: "&LANDDA_INPUTS;"
ATMOS_FORC: "&FORCING;"
WORKDIR: "&WORKDIR;"
CYCLEDIR: "&CYCLEDIR;"
EXECdir: "&EXECdir;"
OUTDIR: "&OUTDIR;"
CTIME: "&CTIME;"
PTIME: "&PTIME;"
fv3bundle_vn: "&fv3bundle_vn;"
DAtype: "&DAtype;"
SNOWDEPTHVAR: "&SNOWDEPTHVAR;"
account: "&ACCOUNT;"
command: "&CYCLEDIR;/jobs/JLANDDA_PREP_BMAT"
jobname: prepbmat
cores: 1
walltime: 00:02:00
queue: batch
dependency:
taskdep:
attrs:
task: prepobs
task_runana:
envars:
OBS_TYPES: "&OBS_TYPES;"
MACHINE: "&MACHINE;"
ACCOUNT: "&ACCOUNT;"
EXP_NAME: "&EXP_NAME;"
LANDDA_INPUTS: "&LANDDA_INPUTS;"
ATMOS_FORC: "&FORCING;"
RES: "&RES;"
TSTUB: "&TSTUB;"
WORKDIR: "&WORKDIR;"
CYCLEDIR: "&CYCLEDIR;"
EXECdir: "&EXECdir;"
OUTDIR: "&OUTDIR;"
CTIME: "&CTIME;"
PTIME: "&PTIME;"
NTIME: "&NTIME;"
fv3bundle_vn: "&fv3bundle_vn;"
DAtype: "&DAtype;"
SNOWDEPTHVAR: "&SNOWDEPTHVAR;"
NPROC_JEDI: "&NPROCS_ANA;"
JEDI_INSTALL: "&JEDI_INSTALL;"
account: "&ACCOUNT;"
command: "&CYCLEDIR;/jobs/JLANDDA_PREP_OBS"
jobname: runana
nodes: "1:ppn=&NPROCS_ANA;"
walltime: 00:15:00
queue: batch
dependency:
taskdep:
attrs:
task: prepbmat
task_runfcst:
envars:
OBS_TYPES: "&OBS_TYPES;"
MACHINE: "&MACHINE;"
ACCOUNT: "&ACCOUNT;"
EXP_NAME: "&EXP_NAME;"
LANDDA_INPUTS: "&LANDDA_INPUTS;"
ATMOS_FORC: "&FORCING;"
RES: "&RES;"
TSTUB: "&TSTUB;"
WORKDIR: "&WORKDIR;"
CYCLEDIR: "&CYCLEDIR;"
EXECdir: "&EXECdir;"
OUTDIR: "&OUTDIR;"
CTIME: "&CTIME;"
PTIME: "&PTIME;"
NTIME: "&NTIME;"
fv3bundle_vn: "&fv3bundle_vn;"
DAtype: "&DAtype;"
SNOWDEPTHVAR: "&SNOWDEPTHVAR;"
JEDI_INSTALL: "&JEDI_INSTALL;"
FCSTHR: "&FCSTHR;"
account: "&ACCOUNT;"
command: "&CYCLEDIR;/jobs/JLANDDA_RUN_FCST"
jobname: runfcst
nodes: "1:ppn=&NPROCS_FCST;"
walltime: 00:30:00
queue: batch
dependency:
taskdep:
attrs:
task: runana
171 changes: 171 additions & 0 deletions parm/land_analysis_gswp3_orion.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,171 @@
workflow:
attrs:
realtime: false
scheduler: slurm
cycledef:
- attrs:
group: epic
spec: 200001030000 200001030000 24:00:00
entities:
MACHINE: "orion"
ACCOUNT: "epic"
EXP_NAME: "LETKF"
EXP_BASEDIR: "/work/noaa/epic/chjeon/landda_gswp3"
JEDI_INSTALL: "/work/noaa/epic/UFS_Land-DA/jedi"
LANDDA_INPUTS: "/work/noaa/epic/UFS_Land-DA/inputs"
FORCING: "gswp3"
RES: "96"
FCSTHR: "24"
NPROCS_ANA: "6"
NPROCS_FCST: "6"
OBS_TYPES: "GHCN"
fv3bundle_vn: "psl_develop"
DAtype: "letkfoi_snow"
SNOWDEPTHVAR: "snwdph"
TSTUB: "oro_C96.mx100"
WORKDIR: "&EXP_BASEDIR;/workdir"
CYCLEDIR: "&EXP_BASEDIR;/land-DA_workflow"
EXECdir: "&CYCLEDIR;/exec"
OUTDIR: "&EXP_BASEDIR;/landda_expts/DA_gswp3_test"
LOG: "&EXP_BASEDIR;/tests"
PATHRT: "&EXP_BASEDIR;"
CTIME: "<cyclestr>@Y@m@d@H</cyclestr>"
PTIME: "<cyclestr offset='-24:00:00'>@Y@m@d@H</cyclestr>"
NTIME: "<cyclestr offset='24:00:00'>@Y@m@d@H</cyclestr>"
log: "&LOG;/workflow.log"
tasks:
task_prepexp:
envars:
MACHINE: "&MACHINE;"
ACCOUNT: "&ACCOUNT;"
EXP_NAME: "&EXP_NAME;"
LANDDA_INPUTS: "&LANDDA_INPUTS;"
ATMOS_FORC: "&FORCING;"
RES: "&RES;"
TSTUB: "&TSTUB;"
WORKDIR: "&WORKDIR;"
CYCLEDIR: "&CYCLEDIR;"
EXECdir: "&EXECdir;"
OUTDIR: "&OUTDIR;"
CTIME: "&CTIME;"
PTIME: "&PTIME;"
account: "&ACCOUNT;"
command: "&CYCLEDIR;/jobs/JLANDDA_PREP_EXP"
jobname: prepexp
cores: 1
walltime: 00:02:00
queue: batch
task_prepobs:
envars:
OBS_TYPES: "&OBS_TYPES;"
MACHINE: "&MACHINE;"
ACCOUNT: "&ACCOUNT;"
EXP_NAME: "&EXP_NAME;"
LANDDA_INPUTS: "&LANDDA_INPUTS;"
ATMOS_FORC: "&FORCING;"
WORKDIR: "&WORKDIR;"
CYCLEDIR: "&CYCLEDIR;"
EXECdir: "&EXECdir;"
OUTDIR: "&OUTDIR;"
CTIME: "&CTIME;"
PTIME: "&PTIME;"
account: "&ACCOUNT;"
command: "&CYCLEDIR;/jobs/JLANDDA_PREP_OBS"
jobname: prepobs
cores: 1
walltime: 00:02:00
queue: batch
dependency:
taskdep:
attrs:
task: prepexp
task_prepbmat:
envars:
MACHINE: "&MACHINE;"
ACCOUNT: "&ACCOUNT;"
EXP_NAME: "&EXP_NAME;"
LANDDA_INPUTS: "&LANDDA_INPUTS;"
ATMOS_FORC: "&FORCING;"
WORKDIR: "&WORKDIR;"
CYCLEDIR: "&CYCLEDIR;"
EXECdir: "&EXECdir;"
OUTDIR: "&OUTDIR;"
CTIME: "&CTIME;"
PTIME: "&PTIME;"
fv3bundle_vn: "&fv3bundle_vn;"
DAtype: "&DAtype;"
SNOWDEPTHVAR: "&SNOWDEPTHVAR;"
account: "&ACCOUNT;"
command: "&CYCLEDIR;/jobs/JLANDDA_PREP_BMAT"
jobname: prepbmat
cores: 1
walltime: 00:02:00
queue: batch
dependency:
taskdep:
attrs:
task: prepobs
task_runana:
envars:
OBS_TYPES: "&OBS_TYPES;"
MACHINE: "&MACHINE;"
ACCOUNT: "&ACCOUNT;"
EXP_NAME: "&EXP_NAME;"
LANDDA_INPUTS: "&LANDDA_INPUTS;"
ATMOS_FORC: "&FORCING;"
RES: "&RES;"
TSTUB: "&TSTUB;"
WORKDIR: "&WORKDIR;"
CYCLEDIR: "&CYCLEDIR;"
EXECdir: "&EXECdir;"
OUTDIR: "&OUTDIR;"
CTIME: "&CTIME;"
PTIME: "&PTIME;"
NTIME: "&NTIME;"
fv3bundle_vn: "&fv3bundle_vn;"
DAtype: "&DAtype;"
SNOWDEPTHVAR: "&SNOWDEPTHVAR;"
NPROC_JEDI: "&NPROCS_ANA;"
JEDI_INSTALL: "&JEDI_INSTALL;"
account: "&ACCOUNT;"
command: "&CYCLEDIR;/jobs/JLANDDA_PREP_OBS"
jobname: runana
nodes: "1:ppn=&NPROCS_ANA;"
walltime: 00:15:00
queue: batch
dependency:
taskdep:
attrs:
task: prepbmat
task_runfcst:
envars:
OBS_TYPES: "&OBS_TYPES;"
MACHINE: "&MACHINE;"
ACCOUNT: "&ACCOUNT;"
EXP_NAME: "&EXP_NAME;"
LANDDA_INPUTS: "&LANDDA_INPUTS;"
ATMOS_FORC: "&FORCING;"
RES: "&RES;"
TSTUB: "&TSTUB;"
WORKDIR: "&WORKDIR;"
CYCLEDIR: "&CYCLEDIR;"
EXECdir: "&EXECdir;"
OUTDIR: "&OUTDIR;"
CTIME: "&CTIME;"
PTIME: "&PTIME;"
NTIME: "&NTIME;"
fv3bundle_vn: "&fv3bundle_vn;"
DAtype: "&DAtype;"
SNOWDEPTHVAR: "&SNOWDEPTHVAR;"
JEDI_INSTALL: "&JEDI_INSTALL;"
FCSTHR: "&FCSTHR;"
account: "&ACCOUNT;"
command: "&CYCLEDIR;/jobs/JLANDDA_RUN_FCST"
jobname: runfcst
nodes: "1:ppn=&NPROCS_FCST;"
walltime: 00:45:00
queue: batch
dependency:
taskdep:
attrs:
task: runana
Loading