fix: prevent error when accessing index data_type value

* This requires an upgrade to virtool-core==3.0.0.
* Mock API shapes were updated.

pyproject.toml

@@ -19,7 +19,7 @@ python = "^3.10"
 click = "^8.0.0"
 aiohttp = "^3.8.1"
 aiofiles = "^0.7.0"
-virtool-core = "^2.0.0"
+virtool-core = "^3.0.0"
 aioredis = "1.3.1"
 sentry-sdk = "^1.5.7"
 pyfixtures = "^1.0.0"

tests/api/__snapshots__/test_indexes_api.ambr

@@ -46,7 +46,9 @@
     ]),
     'ready': True,
     'reference': dict({
+      'data_type': <ReferenceDataType.genome: 'genome'>,
       'id': '21n3j5v6',
+      'name': 'Clone of Banana Viruses',
     }),
     'user': dict({
       'administrator': False,
@@ -104,7 +106,9 @@
     ]),
     'ready': False,
     'reference': dict({
+      'data_type': <ReferenceDataType.genome: 'genome'>,
       'id': '21n3j5v6',
+      'name': 'Clone of Banana Viruses',
     }),
     'user': dict({
       'administrator': False,

tests/api/mocks/mock_analysis_routes.py

@@ -32,7 +32,7 @@ async def get_analysis(request):
             "index": {"id": "qldihken", "version": 0},
             "job": {"id": "test_job"},
             "ready": False,
-            "reference": {"id": "foo", "name": "Foo"},
+            "reference": {"id": "foo", "name": "Foo", "data_type": "genome"},
             "sample": {"id": "kigvhuql", "name": "Test 1"},
             "subtractions": [{"id": "yhxoynb0", "name": "Arabidopsis Thaliana"}],
             "user": {"id": "abc12345", "handle": "igboyes", "administrator": False},
@@ -116,5 +116,5 @@ async def upload_result(request):
     "user": {"id": "abc12345", "handle": "igboyes", "administrator": False},
     "subtractions": [{"id": "yhxoynb0", "name": "Arabidopsis Thaliana"}],
     "ready": False,
-    "reference": {"id": "foo", "name": "Foo"},
+    "reference": {"id": "foo", "name": "Foo", "data_type": "genome"},
 }