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iSanXoT-1.2.7
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@jmrodriguezc jmrodriguezc released this 23 Jan 13:01
· 108 commits to master since this release
1.2.7
fc82824 
DATE: 2023_01

Highlights

  • Improve the User Guide documentation in the iSanXoT help:

    • Update the documentation.
    • Divide by sections the documentation in multiple files.

  • Update the iSanXoT Wiki:

    • Add the user guide files.
    • Add the Case studies.
    • Add the adaptor cases.

  • NORCOMBINE:

    • Changes in the output file names.
    • Cardenio will recognize the experiment by the name of sample.

Changes in the Graphical User Interface

  • Improve the User Guide documentation in the iSanXoT help.
    renamed: app/app/User_Guide.html -> app/app/User_Guide.htm
    modified: app/app/User_Guide_files/image002.jpg
    modified: app/app/User_Guide_files/image003.png
    modified: app/app/User_Guide_files/image004.jpg
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    modified: app/app/User_Guide_files/image006.png
    modified: app/app/User_Guide_files/image007.png
    modified: app/app/User_Guide_files/image009.png
    modified: app/app/User_Guide_files/image010.png
    modified: app/app/User_Guide_files/image013.png
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    modified: app/app/User_Guide_files/image020.png
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    modified: app/app/User_Guide_files/image024.png
    modified: app/app/User_Guide_files/image027.png
    modified: app/app/User_Guide_files/image029.png
    modified: app/app/User_Guide_files/image031.png
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    modified: app/app/User_Guide_files/image049.png
    modified: app/app/User_Guide_files/image050.png
    modified: app/app/User_Guide_files/image051.png
    modified: app/app/renderer-process/imports.js
    deleted: app/app/sections/helps/help_cmds.html
    deleted: app/app/sections/helps/help_get-started.html
    deleted: app/app/sections/helps/help_intro.html
    deleted: app/app/sections/helps/help_wf-basic.html
    deleted: app/app/sections/helps/help_wf-lblfree.html
    deleted: app/app/sections/helps/help_wf-ptm.html

  • LEVEL_CREATOR: Accepts the following operation for the ratio denominator: IS = if( or(count(a1…a4)=0, count(b1…b4)=0), '', Average(average(a1…a4), average(b1…b4)))
    [Intensity A_01 , Intensity A_02 , Intensity A_03 , Intensity A_04] , [Intensity B_01 , Intensity B_02 , Intensity B_03 , Intensity B_04]
    modified: app/resources/src/cmds/createLevels.py

Changes in the Code Workflow

  • Come back in the 'problem': Fix a problem in ProteinAssigner when the pandas does not interpreted the Protein Accessions column as string.
    renamed: app/resources/src/cmds/extractQuant.py -> app/resources/src/cmds/extractquant.py
    modified: app/resources/src/cmds/ProteinAssigner_v3.py

  • Reducing the path in the log report.
    modified: app/resources/wfs/table2cfg.py

  • NORCOMBINE:

    • Changes in the file names.
      modified: app/resources/wfs/tpl_commands/norcombine.yaml
    • Cardenio will recognize the experiment by the name of sample.
      modified: app/resources/src/cmds/createCardenioTags.py

  • Add the option to have multiple samaples in the inputs and the outpus.
    modified: app/resources/wfs/table2cfg.py

Assets 5
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