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Eric Deutsch edited this page Jun 3, 2019 · 12 revisions

Bioinformatics Hub at the ASMS 2019 Annual Conference

Overview

The Informatics Hub is a place where informaticians gather together with three aims:

  1. to provide their advice, knowledge, and support to anyone with a relevant question;
  2. to discuss current issues and challenges in mass spectrometry informatics with the entire community;
  3. to work on interesting, synergistic projects and to freely exchange tools, algorithms and know-how with each other, across all labs, seniorities and levels of experience.

Main Meeting

Bioinformatics Hub Schedule:

The Bioinformatics Hub will be located at the Poster/Exhibit Hall, next to the main entrance. It is open each day during exhibit hall hours.

We have arranged discussions about special topics for certain time slots. There will be one or two facilitators to kick off a discussion with a short introduction to the topic (morning sessions) or a "for and against" debate (afternoon sessions) to start things off, followed by open mic discussion. The topics and facilitators are list below (topics, schedule and facilitators still to be decided):

Monday June 3:

  • 10:30-12:30 Integrating RNA-Seq and proteomics data (Dave Tabb)
  • 12:30-14:30 Repositories (Juan Antonio Vizcaino)

Tuesday June 4:

  • 10:30-12:30 Statistics: common pitfalls and good practices (Lukas Kall, Veit Schwammle)
  • 12:30-14:30 False-discovery rates in data-independant Acquisition (DIA) (Isabell Bludau, Lindsay Pino)

Wednesday June 5:

  • 10:30-12:30 Creative applications of isotopic labeling: subcellular and thermal proteomics
  • 12:30-14:30 OpenMS (Hannest Rost, Dijkstra)

Thursday June 6:

  • 10:30-12:30 Protein Structure (Michael Hoopmann, Delonghe)
  • 12:30-14:30 General Q&A

Attending Organizers:

  • Sue Weintraub
  • Magnus Palmblad
  • Eric Deutsch
  • Nuno Bandeira
  • Alexey Nesvizhskii
  • Oliver Kohlbacher
  • Juan Antonio Vizcaíno
  • Hannes Röst
  • Kelly Ruggles
  • Sam Payne
  • David Tabb
  • Brian Searle
  • Mike Washburn
  • Veit Schwämmle

Other Confirmed Participants

  • All others are welcome!

Visit us at http://compms.org/

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