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indexing #60

Merged
merged 18 commits into from
Feb 28, 2024
Merged

indexing #60

merged 18 commits into from
Feb 28, 2024

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Koeng101
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this PR is to add indexing as a feature to dnadesign. This would let you have a stored index of offset+length for different files, and read them using a readerAt.

This is mainly used for fastq (#57), but I see no reason to not have this be a generic feature of all of our parsers - in fact, we can even have a generic index file (file extension: ddidx for dnadesign index).

@Koeng101 Koeng101 mentioned this pull request Feb 14, 2024
@Koeng101
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This just needs more documentation and context around indexing, but is essentially ready.

@Koeng101 Koeng101 merged commit 025f71d into main Feb 28, 2024
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