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TE list in Arabidopsis thaliana herbarium specimen detected by TEFv1.4

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@akiomiyao akiomiyao released this 18 Dec 05:44
· 22 commits to main since this release
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TEs in Arabidopsis thaliana herbarium specimen were reanalyzed by TEF v1.4.
Transpositions were detected between each accession and SRR13608004(Col-0).
TE Head-Tail pairs which detected at least two positions on the TAIR10 reference genome were listed.
TE names listed in TAIR10_TE.fas.txt are shown in the table.
TEs without name are detected for the first time in this analysis.