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short-read-mngs-viral-benchmarks.yml
299 workflow run results
299 workflow run results

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Test release short-read-mngs viral benchmarks #2018: Commit 5206803 pushed by lvreynoso
May 10, 2024 04:21 16s lvreynoso/diamond_sensitive
lvreynoso/diamond_sensitive
May 10, 2024 04:21 16s
Fix test diamond_args value short-read-mngs viral benchmarks #2017: Commit 460624e pushed by lvreynoso
May 10, 2024 00:13 19m 58s lvreynoso/diamond_sensitive
lvreynoso/diamond_sensitive
May 10, 2024 00:13 19m 58s
Update required diamond wdl version short-read-mngs viral benchmarks #2016: Commit ab9da24 pushed by lvreynoso
May 9, 2024 23:33 14m 37s lvreynoso/diamond_sensitive
lvreynoso/diamond_sensitive
May 9, 2024 23:33 14m 37s
Parameterize aligner wdl versions (#356) short-read-mngs viral benchmarks #2015: Commit f75846b pushed by lvreynoso
May 9, 2024 22:36 19m 51s main
main
May 9, 2024 22:36 19m 51s
Allow multiple arguments to diamond blastx (#355) short-read-mngs viral benchmarks #2014: Commit d4e726b pushed by lvreynoso
May 9, 2024 22:36 17s main
main
May 9, 2024 22:36 17s
Merge remote-tracking branch 'origin/main' into lvreynoso/diamond_sen… short-read-mngs viral benchmarks #2013: Commit eff1869 pushed by lvreynoso
May 9, 2024 00:49 15s lvreynoso/diamond_sensitive
lvreynoso/diamond_sensitive
May 9, 2024 00:49 15s
Bump rustix in /workflows/index-generation/ncbi-compress short-read-mngs viral benchmarks #2012: Commit 477ec0b pushed by dependabot bot
May 8, 2024 22:34 13s dependabot/cargo/workflows/index-generation/ncbi-compress/rustix-0.37.27
dependabot/cargo/workflows/index-generation/ncbi-compress/rustix-0.37.27
May 8, 2024 22:34 13s
Bump shlex in /workflows/index-generation/ncbi-compress short-read-mngs viral benchmarks #2011: Commit 64da5ce pushed by dependabot bot
May 8, 2024 22:33 13s dependabot/cargo/workflows/index-generation/ncbi-compress/shlex-1.3.0
dependabot/cargo/workflows/index-generation/ncbi-compress/shlex-1.3.0
May 8, 2024 22:33 13s
NCBI Index Compression (#262) short-read-mngs viral benchmarks #2010: Commit 6d4a2be pushed by phoenixAja
May 8, 2024 22:33 14s main
main
May 8, 2024 22:33 14s
Fix string interpolation for short read alignment run locally short-read-mngs viral benchmarks #2009: Commit 4b64746 pushed by lvreynoso
May 8, 2024 22:22 14m 36s lvreynoso/diamond_sensitive
lvreynoso/diamond_sensitive
May 8, 2024 22:22 14m 36s
Merge branch 'main' into tmorse-nt-compression short-read-mngs viral benchmarks #2008: Commit b7dc9db pushed by phoenixAja
May 8, 2024 22:00 19m 33s tmorse-nt-compression
tmorse-nt-compression
May 8, 2024 22:00 19m 33s
Move diamond changes to another branch short-read-mngs viral benchmarks #2007: Commit 72ca008 pushed by lvreynoso
May 8, 2024 21:47 14s lvreynoso/diamond_sensitive
lvreynoso/diamond_sensitive
May 8, 2024 21:47 14s
Parameterize aligner wdl versions short-read-mngs viral benchmarks #2006: Commit aefd121 pushed by lvreynoso
May 8, 2024 21:45 19m 29s lvreynoso/specify_diamond_minmap2_wdl_versions
lvreynoso/specify_diamond_minmap2_wdl_versions
May 8, 2024 21:45 19m 29s
Allow multiple arguments to diamond blastx short-read-mngs viral benchmarks #2005: Commit 3a3c9bd pushed by lvreynoso
May 8, 2024 21:23 15s lvreynoso/enable_multiple_diamond_args
lvreynoso/enable_multiple_diamond_args
May 8, 2024 21:23 15s
Remove SRST2 from workflows (#354) short-read-mngs viral benchmarks #2004: Commit 70567a9 pushed by lvreynoso
May 8, 2024 20:32 20m 17s main
main
May 8, 2024 20:32 20m 17s
Revert release short-read-mngs viral benchmarks #2003: Commit 6c3fbad pushed by lvreynoso
May 8, 2024 16:01 1m 40s lvreynoso/remove_srst2
lvreynoso/remove_srst2
May 8, 2024 16:01 1m 40s
Test release short-read-mngs viral benchmarks #2002: Commit 64ba2c3 pushed by lvreynoso
May 8, 2024 00:10 15s lvreynoso/remove_srst2
lvreynoso/remove_srst2
May 8, 2024 00:10 15s
Add backwards compatibility to diamond_blastx short-read-mngs viral benchmarks #2001: Commit 6122cfd pushed by lvreynoso
May 7, 2024 22:00 14s lvreynoso/diamond_sensitive
lvreynoso/diamond_sensitive
May 7, 2024 22:00 14s
Lint short-read-mngs viral benchmarks #2000: Commit e69578c pushed by lvreynoso
May 7, 2024 21:03 19m 55s lvreynoso/remove_srst2
lvreynoso/remove_srst2
May 7, 2024 21:03 19m 55s
Remove SRST2 from wdl, dockerfile, dag short-read-mngs viral benchmarks #1999: Commit d95d3c6 pushed by lvreynoso
May 7, 2024 18:29 20m 5s lvreynoso/remove_srst2
lvreynoso/remove_srst2
May 7, 2024 18:29 20m 5s
Bump jinja2 from 3.1.3 to 3.1.4 in /workflows/benchmark short-read-mngs viral benchmarks #1998: Commit 1fe4477 pushed by dependabot bot
May 6, 2024 20:53 15s dependabot/pip/workflows/benchmark/jinja2-3.1.4
dependabot/pip/workflows/benchmark/jinja2-3.1.4
May 6, 2024 20:53 15s
Merge branch 'main' into tmorse-nt-compression short-read-mngs viral benchmarks #1997: Commit 8afaba7 pushed by phoenixAja
May 6, 2024 16:58 16m 15s tmorse-nt-compression
tmorse-nt-compression
May 6, 2024 16:58 16m 15s
[CZID-9457] - update PHAGE_FAMILIES_NAMES (#352) short-read-mngs viral benchmarks #1996: Commit 4ccee1a pushed by ninabernick
May 6, 2024 16:33 17s main
main
May 6, 2024 16:33 17s
add more phage families short-read-mngs viral benchmarks #1995: Commit 9bee2f5 pushed by phoenixAja
May 6, 2024 16:02 16s phoenix/update-phage-families
phoenix/update-phage-families
May 6, 2024 16:02 16s
update PHAGE_FAMILIES_NAMES short-read-mngs viral benchmarks #1994: Commit 15c9556 pushed by phoenixAja
May 3, 2024 22:37 13s phoenix/update-phage-families
phoenix/update-phage-families
May 3, 2024 22:37 13s