sim-fish 0.2

Version 0.2.0:

Major upgrades
Add extranuclear and pericellular patterns to simulate (a7c39ce).

Minor upgrades
Update documentation and images with new patterns (6efba18, 468f339, 3edf8cc).

Bug fixes
Fix bug foci pattern simulation (536e3a0).

sim-fish 0.1

Version 0.1.0:

Major upgrades
Add a probability_map parameter in simfish.simulate_ground_truth to bias the sampling of spots (fd76e9f).
Remove subpackage, add unit tests and refactor modules to match latest big-fish versions (b368cd8, d149c05, efec9ba, c3a03fd, 8f03a5e, 3195335, f148e84, feafad2, 9324a3b, 875f6da, b4705e3, dfcab8a).
Add online documentation (e0188ba, d2cf462, b620ab9, 9d6506f, 1023d43, 305e020, 4de333b).
Remove the noise subtraction from amplitude (1a1bbee)
Add functions to build template cells from a bank of cell instances (beb4b18).
Add function to simulate localization patterns (f640bc2, 5f0a7dc, 5015113).
Add a loader function for the template data (d223e22).

Minor upgrades
Unpin requirements (161abb2).
Update requirements.txt file (e9000ce, de8ac5a).
Update setup.py file (ab68057, 2e12dd9).
Update readme file (f3aeece, 4752b7f, 2e21210).
Add bash scripts to build the package (06aae59).
Update .gitignore file (d4809a8, 5d83b8a)
Add several config files for code coverage, CI and documentation (886964e).

Bug fixes
Fix bug during cluster simulation (da5c303).
Fix bug to sample spot coordinates at the edge of the frame (154017a).
Fix bug with negative values in background noise (8b608f9).