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Releases: id-bioinfo/F1ALA

v2.1.0

15 Nov 07:38
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Add a function (--tree_BFS) to collaspe the tree into multiple clusters based on the ancestal lineage annotation.
For large clusters (>exploreTreeNodeLimit), a BFS algorithm will stratify them into smaller bubbles.
Small clusters (<smallClusterLimit) and small bubbles (<smallBubbleLimit) will be merged into their perent clusters/bubbles.

v2.0.0

10 Nov 02:58
4e2e822
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TIPars2: An ultrafast and memory-efficient ancestral lineage annotator for huge SARS-CoV-2 phylogeny using F1-score
Initial release inlucdes two major founctions: ancestral lineage annotattion and tree refinement.