Code

Anchor barcodes during demultiplexing#58

Code

Merged

colinvwood merged 17 commits intoqiime2:devqiime2/q2-cutadapt:devfrom vaamb:anchor_adaptersvaamb/q2-cutadapt:anchor_adaptersCopy head branch name to clipboardDec 5, 2023

+306-30

Commits

Commits on Nov 24, 2023

• Ease the process of anchoring the barcodes at the 5' sites

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• Use -g instead of --front to be more consistent with the reverse-G

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• Add TestDemuxSingle.test_anchored

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• Add TestDemuxSingle.test_anchored_cut

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• Add TestDemuxPaired.test_anchored

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  committed
  aafaa08

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• Add checks to be sure both barcodes are anchored when using demux_paired with mixed_orientation

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  committed
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• Add TestDemuxPaired.test_mixed_orientation_anchored

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  committed
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• Fix lint issues

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Commits on Dec 1, 2023

• Apply suggestions from code review

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  vaamb

  and

  colinvwood

  authored
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• Fix linting issues

  vaamb

  committed
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Commits on Dec 5, 2023

• Raise an error for when trying to anchor the reverse barcode without providing one

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  committed
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• Add TestDemuxPaired.test_dual_index_anchored

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  committed
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• Nits

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• Add _check_paired_requirements helper function

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  committed
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• Remove pylint comment

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  committed
  1fe52d8

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• Fix linting issue

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• whitespace

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