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Updates to radiation, cloud, and land processes for improved surface temperature and radiative flux biases + Allow model_configure to provide a path for FV3ATM output #2581 + Update CICD to move label deletion to Jenkinsfile #2568 #2548

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merged 33 commits into from
Feb 3, 2025
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7c16cbc
update .gitmodules and FV3
rhaesung Jan 3, 2025
0133389
add RT logs on Hera
rhaesung Jan 6, 2025
5a0d69b
add test_chages.list
rhaesung Jan 6, 2025
cfb14bf
update FV3
rhaesung Jan 7, 2025
21c03eb
update FV3
rhaesung Jan 10, 2025
d03348b
Merge remote-tracking branch 'upstream/develop' into hr5
rhaesung Jan 10, 2025
1109d24
update FV3
rhaesung Jan 21, 2025
cadfe2d
update FV3
rhaesung Jan 22, 2025
9bdf92e
update FV3
rhaesung Jan 22, 2025
bc7b492
Update CICD to move label deletion to Jenkinsfile
BruceKropp-Raytheon Jan 24, 2025
6f8e14b
update FV3
rhaesung Jan 29, 2025
3272685
update submodule pointers
rhaesung Jan 29, 2025
be326c3
Merge remote-tracking branch 'upstream/develop' into hr5
rhaesung Jan 29, 2025
898a3dc
Merge branch 'develop' into feature/fix_post_label
ankimball Jan 29, 2025
692fa94
Update bl_date.conf
jkbk2004 Jan 29, 2025
72bc8b3
allow model_configure to provide a path for FV3ATM output
aerorahul Jan 30, 2025
a1fb499
add orion RT log: passed
jkbk2004 Jan 30, 2025
cb90a45
Merge remote-tracking branch 'upstream/feature/issue-2580' into hr5
jkbk2004 Jan 30, 2025
9405db9
add derecho RT log: passed
jkbk2004 Jan 30, 2025
1fba02b
add hera RT log passed
FernandoAndrade-NOAA Jan 30, 2025
df31d70
add gaea c5 RT log passed
FernandoAndrade-NOAA Jan 30, 2025
d88a86a
add gaea c6 RT log passed
FernandoAndrade-NOAA Jan 30, 2025
28ba42b
orion/hercules job card update and hercules RT log: passed
jkbk2004 Jan 31, 2025
6d65805
Merge remote-tracking branch 'upstream/feature/fix_post_label' into hr5
jkbk2004 Jan 31, 2025
f7cfe66
add jet RT log passed
FernandoAndrade-NOAA Jan 31, 2025
5a20cf9
update test_changes.list
FernandoAndrade-NOAA Jan 31, 2025
a12ae93
ORT Jobs Completed.
epic-cicd-jenkins Jan 31, 2025
904f20d
WCOSS2 RT Log: Passed
BrianCurtis-NOAA Jan 31, 2025
11a584c
ORT Jobs Completed.
epic-cicd-jenkins Feb 1, 2025
174e5c7
ORT Jobs Completed.
epic-cicd-jenkins Feb 1, 2025
3d9c5a0
ORT Jobs Completed.
epic-cicd-jenkins Feb 1, 2025
4370439
ORT Jobs Completed.
epic-cicd-jenkins Feb 1, 2025
de59452
update FV3 hash
jkbk2004 Feb 3, 2025
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11 changes: 11 additions & 0 deletions .cicd/Jenkinsfile
Original file line number Diff line number Diff line change
Expand Up @@ -123,6 +123,17 @@ def generateStage(nodeLabel) {
catch(err) {
echo "Error: Post Results from ${nodeLabel}"
}
sh '''
export machine=${NODE_NAME}
export CHANGE_ID=${CHANGE_ID}
GIT_OWNER=$(echo $GIT_URL | cut -d '/' -f4)
GIT_REPO_NAME=$(echo $GIT_URL | cut -d '/' -f5 | cut -d '.' -f1)
set +x

echo "Testing concluded...removing label ${label} for ${machine} from ${GIT_URL}"
echo "https://api.github.com/repos/${GIT_OWNER}/${GIT_REPO_NAME}/issues/${CHANGE_ID}/labels /${machine}-${label}"
curl --silent -X DELETE -H "Accept: application/vnd.github.v3+json" -H "Authorization: Bearer ${GITHUB_TOKEN}" https://api.github.com/repos/${GIT_OWNER}/${GIT_REPO_NAME}/issues/${CHANGE_ID}/labels/{$machine-RT,$machine-BL}
'''
}
}
}
Expand Down
13 changes: 0 additions & 13 deletions .cicd/scripts/post_test_results.sh
Original file line number Diff line number Diff line change
Expand Up @@ -41,19 +41,6 @@ function post_test() {
GIT_URL=${GIT_URL:-"ufs-weather-model"}
CHANGE_ID=${CHANGE_ID:-"develop"}

GIT_OWNER=$(echo ${GIT_URL} | cut -d '/' -f4)
GIT_REPO_NAME=$(echo ${GIT_URL} | cut -d '/' -f5 | cut -d '.' -f1)

set +x
echo "GIT_URL=${GIT_URL}"
echo "CHANGE_ID=${CHANGE_ID}"
echo "GIT_OWNER=${GIT_OWNER} GIT_REPO_NAME=${GIT_REPO_NAME}"

echo "Testing concluded...removing label ${label} for ${machine} from ${GIT_URL}"
echo "https://api.github.com/repos/${GIT_OWNER}/${GIT_REPO_NAME}/issues/${CHANGE_ID}/labels /${machine}-${label}"
curl --silent -X DELETE -H "Accept: application/vnd.github.v3+json" -H "Authorization: Bearer ${GITHUB_TOKEN}" https://api.github.com/repos/${GIT_OWNER}/${GIT_REPO_NAME}/issues/${CHANGE_ID}/labels/${machine}-${label}
set -x

git config user.email "ecc.platform@noaa.gov"
git config user.name "epic-cicd-jenkins"

Expand Down
6 changes: 4 additions & 2 deletions .gitmodules
Original file line number Diff line number Diff line change
@@ -1,7 +1,9 @@
[submodule "FV3"]
path = FV3
url = https://github.com/NOAA-EMC/fv3atm
branch = develop
# url = https://github.com/NOAA-EMC/fv3atm
# branch = develop
url = https://github.com/rhaesung/fv3atm
branch = hr5
[submodule "WW3"]
path = WW3
url = https://github.com/NOAA-EMC/WW3
Expand Down
2 changes: 1 addition & 1 deletion FV3
2 changes: 1 addition & 1 deletion tests/bl_date.conf
Original file line number Diff line number Diff line change
@@ -1 +1 @@
export BL_DATE=20250122
export BL_DATE=20250129
1 change: 1 addition & 0 deletions tests/default_vars.sh
Original file line number Diff line number Diff line change
Expand Up @@ -566,6 +566,7 @@ export OUTPUT_HISTORY=.true.
export HISTORY_FILE_ON_NATIVE_GRID=.false.
export WRITE_DOPOST=.false.
export NUM_FILES=2
export FV3ATM_OUTPUT_DIR="./"
export FILENAME_BASE="'atm' 'sfc'"
export OUTPUT_GRID="'cubed_sphere_grid'"
export OUTPUT_FILE="'netcdf'"
Expand Down
1 change: 1 addition & 0 deletions tests/fv3_conf/fv3_slurm.IN_hercules
Original file line number Diff line number Diff line change
Expand Up @@ -44,6 +44,7 @@ elif [[ @[RT_COMPILER] == gnu ]]; then
export MV2_HOMOGENEOUS_CLUSTER=1
export MV2_USE_ALIGNED_ALLOC=1
fi
export FI_MLX_INJECT_LIMIT=0

# Avoid job errors because of filesystem synchronization delays
sync && sleep 1
Expand Down
1 change: 1 addition & 0 deletions tests/fv3_conf/fv3_slurm.IN_orion
Original file line number Diff line number Diff line change
Expand Up @@ -35,6 +35,7 @@ export OMP_NUM_THREADS=@[THRD]
#export PSM_SHAREDCONTEXTS=1
export ESMF_RUNTIME_PROFILE=ON
export ESMF_RUNTIME_PROFILE_OUTPUT="SUMMARY"
export FI_MLX_INJECT_LIMIT=0

# Avoid job errors because of filesystem synchronization delays
sync && sleep 1
Expand Down
48 changes: 24 additions & 24 deletions tests/logs/OpnReqTests_control_p8_hera.log
Original file line number Diff line number Diff line change
@@ -1,9 +1,9 @@
Fri Jan 24 02:31:13 UTC 2025
Fri Jan 31 04:23:19 UTC 2025
Start Operation Requirement Test


baseline dir = /scratch1/NCEPDEV/stmp4/role.epic/FV3_OPNREQ_TEST/OPNREQ_TEST/control_p8_bit_base_gnu
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_1945597/bit_base_bit_base
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_255542/bit_base_bit_base
Checking test bit_base results ....
Moving baseline bit_base files ....
Moving sfcf000.nc .........OK
Expand Down Expand Up @@ -51,14 +51,14 @@ Moving baseline bit_base files ....
Moving RESTART/20210323.060000.sfc_data.tile5.nc .........OK
Moving RESTART/20210323.060000.sfc_data.tile6.nc .........OK

0: The total amount of wall time = 261.209374
0: The maximum resident set size (KB) = 1444280
0: The total amount of wall time = 267.041788
0: The maximum resident set size (KB) = 1441748

Test bit_base PASS


baseline dir = /scratch1/NCEPDEV/stmp4/role.epic/FV3_OPNREQ_TEST/OPNREQ_TEST/control_p8_dbg_base_gnu
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_1945597/dbg_base_dbg_base
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_255542/dbg_base_dbg_base
Checking test dbg_base results ....
Moving baseline dbg_base files ....
Moving sfcf000.nc .........OK
Expand Down Expand Up @@ -106,14 +106,14 @@ Moving baseline dbg_base files ....
Moving RESTART/20210323.060000.sfc_data.tile5.nc .........OK
Moving RESTART/20210323.060000.sfc_data.tile6.nc .........OK

0: The total amount of wall time = 898.596863
0: The maximum resident set size (KB) = 1423760
0: The total amount of wall time = 872.789975
0: The maximum resident set size (KB) = 1436928

Test dbg_base PASS


baseline dir = /scratch1/NCEPDEV/stmp4/role.epic/FV3_OPNREQ_TEST/OPNREQ_TEST/control_p8_std_base_gnu
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_1945597/dcp_dcp
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_255542/dcp_dcp
Checking test dcp results ....
Comparing sfcf000.nc .....USING NCCMP......OK
Comparing sfcf021.nc .....USING NCCMP......OK
Expand Down Expand Up @@ -160,14 +160,14 @@ Checking test dcp results ....
Comparing RESTART/20210323.060000.sfc_data.tile5.nc .....USING NCCMP......OK
Comparing RESTART/20210323.060000.sfc_data.tile6.nc .....USING NCCMP......OK

0: The total amount of wall time = 230.932286
0: The maximum resident set size (KB) = 1426492
0: The total amount of wall time = 234.483327
0: The maximum resident set size (KB) = 1408912

Test dcp PASS


baseline dir = /scratch1/NCEPDEV/stmp4/role.epic/FV3_OPNREQ_TEST/OPNREQ_TEST/control_p8_std_base_gnu
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_1945597/mpi_mpi
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_255542/mpi_mpi
Checking test mpi results ....
Comparing sfcf000.nc .....USING NCCMP......OK
Comparing sfcf021.nc .....USING NCCMP......OK
Expand Down Expand Up @@ -214,14 +214,14 @@ Checking test mpi results ....
Comparing RESTART/20210323.060000.sfc_data.tile5.nc .....USING NCCMP......OK
Comparing RESTART/20210323.060000.sfc_data.tile6.nc .....USING NCCMP......OK

0: The total amount of wall time = 237.659021
0: The maximum resident set size (KB) = 1420064
0: The total amount of wall time = 243.717673
0: The maximum resident set size (KB) = 1429056

Test mpi PASS


baseline dir = /scratch1/NCEPDEV/stmp4/role.epic/FV3_OPNREQ_TEST/OPNREQ_TEST/control_p8_std_base_gnu
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_1945597/rst_rst
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_255542/rst_rst
Checking test rst results ....
Comparing sfcf000.nc .....USING NCCMP......OK
Comparing sfcf021.nc .....USING NCCMP......OK
Expand Down Expand Up @@ -268,14 +268,14 @@ Checking test rst results ....
Comparing RESTART/20210323.060000.sfc_data.tile5.nc .....USING NCCMP......OK
Comparing RESTART/20210323.060000.sfc_data.tile6.nc .....USING NCCMP......OK

0: The total amount of wall time = 234.966055
0: The maximum resident set size (KB) = 1422512
0: The total amount of wall time = 236.956363
0: The maximum resident set size (KB) = 1428104

Test rst PASS


baseline dir = /scratch1/NCEPDEV/stmp4/role.epic/FV3_OPNREQ_TEST/OPNREQ_TEST/control_p8_std_base_gnu
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_1945597/std_base_std_base
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_255542/std_base_std_base
Checking test std_base results ....
Moving baseline std_base files ....
Moving sfcf000.nc .........OK
Expand Down Expand Up @@ -323,14 +323,14 @@ Moving baseline std_base files ....
Moving RESTART/20210323.060000.sfc_data.tile5.nc .........OK
Moving RESTART/20210323.060000.sfc_data.tile6.nc .........OK

0: The total amount of wall time = 233.819689
0: The maximum resident set size (KB) = 1414824
0: The total amount of wall time = 234.237426
0: The maximum resident set size (KB) = 1414212

Test std_base PASS


baseline dir = /scratch1/NCEPDEV/stmp4/role.epic/FV3_OPNREQ_TEST/OPNREQ_TEST/control_p8_std_base_gnu
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_1945597/thr_thr
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_255542/thr_thr
Checking test thr results ....
Comparing sfcf000.nc .....USING NCCMP......OK
Comparing sfcf021.nc .....USING NCCMP......OK
Expand Down Expand Up @@ -377,11 +377,11 @@ Checking test thr results ....
Comparing RESTART/20210323.060000.sfc_data.tile5.nc .....USING NCCMP......OK
Comparing RESTART/20210323.060000.sfc_data.tile6.nc .....USING NCCMP......OK

0: The total amount of wall time = 231.400420
0: The maximum resident set size (KB) = 1424780
0: The total amount of wall time = 234.394866
0: The maximum resident set size (KB) = 1420120

Test thr PASS

OPERATION REQUIREMENT TEST WAS SUCCESSFUL
Fri Jan 24 03:42:57 UTC 2025
Elapsed time: 01h:11m:45s. Have a nice day!
Fri Jan 31 05:34:53 UTC 2025
Elapsed time: 01h:11m:34s. Have a nice day!
24 changes: 12 additions & 12 deletions tests/logs/OpnReqTests_cpld_control_nowave_noaero_p8_hera.log
Original file line number Diff line number Diff line change
@@ -1,9 +1,9 @@
Fri Jan 24 00:53:56 UTC 2025
Fri Jan 31 02:48:26 UTC 2025
Start Operation Requirement Test


baseline dir = /scratch1/NCEPDEV/stmp4/role.epic/FV3_OPNREQ_TEST/OPNREQ_TEST/cpld_control_c96_noaero_p8_dbg_base_gnu
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_1633720/dbg_base_dbg_base
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_4031136/dbg_base_dbg_base
Checking test dbg_base results ....
Moving baseline dbg_base files ....
Moving sfcf021.tile1.nc .........OK
Expand Down Expand Up @@ -66,14 +66,14 @@ Moving baseline dbg_base files ....
Moving RESTART/iced.2021-03-23-21600.nc .........OK
Moving RESTART/ufs.cpld.cpl.r.2021-03-23-21600.nc .........OK

0: The total amount of wall time = 2476.263104
0: The maximum resident set size (KB) = 1491168
0: The total amount of wall time = 2371.215237
0: The maximum resident set size (KB) = 1520304

Test dbg_base PASS


baseline dir = /scratch1/NCEPDEV/stmp4/role.epic/FV3_OPNREQ_TEST/OPNREQ_TEST/cpld_control_c96_noaero_p8_std_base_gnu
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_1633720/rst_rst
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_4031136/rst_rst
Checking test rst results ....
Comparing sfcf021.tile1.nc .....USING NCCMP......OK
Comparing sfcf021.tile2.nc .....USING NCCMP......OK
Expand Down Expand Up @@ -135,14 +135,14 @@ Checking test rst results ....
Comparing RESTART/iced.2021-03-23-21600.nc .....USING NCCMP......OK
Comparing RESTART/ufs.cpld.cpl.r.2021-03-23-21600.nc .....USING NCCMP......OK

0: The total amount of wall time = 662.263266
0: The maximum resident set size (KB) = 1495952
0: The total amount of wall time = 669.148303
0: The maximum resident set size (KB) = 1492232

Test rst PASS


baseline dir = /scratch1/NCEPDEV/stmp4/role.epic/FV3_OPNREQ_TEST/OPNREQ_TEST/cpld_control_c96_noaero_p8_std_base_gnu
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_1633720/std_base_std_base
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_4031136/std_base_std_base
Checking test std_base results ....
Moving baseline std_base files ....
Moving sfcf021.tile1.nc .........OK
Expand Down Expand Up @@ -205,11 +205,11 @@ Moving baseline std_base files ....
Moving RESTART/iced.2021-03-23-21600.nc .........OK
Moving RESTART/ufs.cpld.cpl.r.2021-03-23-21600.nc .........OK

0: The total amount of wall time = 666.677233
0: The maximum resident set size (KB) = 1493700
0: The total amount of wall time = 670.998839
0: The maximum resident set size (KB) = 1491228

Test std_base PASS

OPERATION REQUIREMENT TEST WAS SUCCESSFUL
Fri Jan 24 02:31:12 UTC 2025
Elapsed time: 01h:37m:16s. Have a nice day!
Fri Jan 31 04:23:19 UTC 2025
Elapsed time: 01h:34m:54s. Have a nice day!
30 changes: 15 additions & 15 deletions tests/logs/OpnReqTests_regional_control_hera.log
Original file line number Diff line number Diff line change
@@ -1,9 +1,9 @@
Thu Jan 23 22:11:22 UTC 2025
Fri Jan 31 00:13:41 UTC 2025
Start Operation Requirement Test


baseline dir = /scratch1/NCEPDEV/stmp4/role.epic/FV3_OPNREQ_TEST/OPNREQ_TEST/regional_control_bit_base_gnu
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_905248/bit_base_bit_base
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_2753215/bit_base_bit_base
Checking test bit_base results ....
Moving baseline bit_base files ....
Moving dynf000.nc .........OK
Expand All @@ -15,14 +15,14 @@ Moving baseline bit_base files ....
Moving NATLEV.GrbF00 .........OK
Moving NATLEV.GrbF06 .........OK

0: The total amount of wall time = 1400.218854
0: The maximum resident set size (KB) = 768752
0: The total amount of wall time = 1394.736805
0: The maximum resident set size (KB) = 770024

Test bit_base PASS


baseline dir = /scratch1/NCEPDEV/stmp4/role.epic/FV3_OPNREQ_TEST/OPNREQ_TEST/regional_control_std_base_gnu
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_905248/dcp_dcp
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_2753215/dcp_dcp
Checking test dcp results ....
Comparing dynf000.nc .....USING NCCMP......OK
Comparing dynf006.nc .....USING NCCMP......OK
Expand All @@ -33,14 +33,14 @@ Checking test dcp results ....
Comparing NATLEV.GrbF00 .....USING CMP......OK
Comparing NATLEV.GrbF06 .....USING CMP......OK

0: The total amount of wall time = 2207.914111
0: The maximum resident set size (KB) = 724580
0: The total amount of wall time = 2196.905282
0: The maximum resident set size (KB) = 732360

Test dcp PASS


baseline dir = /scratch1/NCEPDEV/stmp4/role.epic/FV3_OPNREQ_TEST/OPNREQ_TEST/regional_control_std_base_gnu
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_905248/std_base_std_base
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_2753215/std_base_std_base
Checking test std_base results ....
Moving baseline std_base files ....
Moving dynf000.nc .........OK
Expand All @@ -52,14 +52,14 @@ Moving baseline std_base files ....
Moving NATLEV.GrbF00 .........OK
Moving NATLEV.GrbF06 .........OK

0: The total amount of wall time = 2203.715305
0: The maximum resident set size (KB) = 714620
0: The total amount of wall time = 2262.565950
0: The maximum resident set size (KB) = 721116

Test std_base PASS


baseline dir = /scratch1/NCEPDEV/stmp4/role.epic/FV3_OPNREQ_TEST/OPNREQ_TEST/regional_control_std_base_gnu
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_905248/thr_thr
working dir = /scratch1/NCEPDEV/stmp2/role.epic/FV3_OPNREQ_TEST/opnReqTest_2753215/thr_thr
Checking test thr results ....
Comparing dynf000.nc .....USING NCCMP......OK
Comparing dynf006.nc .....USING NCCMP......OK
Expand All @@ -70,11 +70,11 @@ Checking test thr results ....
Comparing NATLEV.GrbF00 .....USING CMP......OK
Comparing NATLEV.GrbF06 .....USING CMP......OK

0: The total amount of wall time = 2202.404532
0: The maximum resident set size (KB) = 724172
0: The total amount of wall time = 2229.744034
0: The maximum resident set size (KB) = 723280

Test thr PASS

OPERATION REQUIREMENT TEST WAS SUCCESSFUL
Fri Jan 24 00:56:07 UTC 2025
Elapsed time: 02h:44m:46s. Have a nice day!
Fri Jan 31 02:48:25 UTC 2025
Elapsed time: 02h:34m:44s. Have a nice day!
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